GT66 M02
NM_008408
LOCUS NM_008408 3802 bp mRNA linear ROD 22-DEC-2003
DEFINITION Mus musculus intergral membrane protein 1 (Itm1), mRNA.
ACCESSION NM_008408
VERSION NM_008408.2 GI:31560679
KEYWORDS .
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus.
REFERENCE 1
AUTHORS The FANTOM Consortium and the RIKEN Genome Exploration Research
Group Phase I & II Team.
TITLE Analysis of the mouse transcriptome based on functional annotation
of 60,770 full-length cDNAs
JOURNAL Nature 420, 563-573 (2002)
REFERENCE 2 (bases 1 to 3802)
AUTHORS Hong,G., Deleersnijder,W., Kozak,C.A., Van Marck,E., Tylzanowski,P.
and Merregaert,J.
TITLE Molecular cloning of a highly conserved mouse and human integral
membrane protein (Itm1) and genetic mapping to mouse chromosome 9
JOURNAL Genomics 31 (3), 295-300 (1996)
PUBMED 8838310
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AK030363.1.
On Jun 10, 2003 this sequence version replaced gi:6680497.
FEATURES Location/Qualifiers
source 1..3802
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="taxon:10090"
/chromosome="9"
/map="9 20.0 cM"
gene 1..3802
/gene="Itm1"
/db_xref="GeneID:16430"
/db_xref="LocusID:16430"
/db_xref="MGI:105124"
CDS 133..2250
/gene="Itm1"
/note="go_component: integral to membrane [goid 0016021]
[evidence TAS] [pmid 12466851];
go_component: membrane [goid 0016020] [evidence IEA];
go_component: extracellular space [goid 0005615] [evidence
TAS] [pmid 12466851];
go_function: oligosaccharyl transferase activity [goid
0004576] [evidence IEA];
go_process: protein amino acid glycosylation [goid
0006486] [evidence IEA]"
/codon_start=1
/product="intergral membrane protein 1"
/protein_id="NP_032434.2"
/db_xref="GI:31560680"
/db_xref="GeneID:16430"
/db_xref="LocusID:16430"
/db_xref="MGI:105124"
/translation="MTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFAVLRFESV
IHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHV
LHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISR
SVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAKCALAYFYMVSSWGGYVFLINL
IPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAAFGVFGL
CQIHAFVDYLCSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLTGKISPWTGRFYSLL
DPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMY
GVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVVSTYMKNLDISRPDKKSKKQQDSTY
PIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREA
YYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKA
YEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTETGRHIKENDYYTPTGEF
RVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGFDRVRNAEIGNKDFELDVLEEAY
TTEHWLVRIYKVKDLDNRGLSRT"
misc_feature 133..2247
/gene="Itm1"
/note="KOG2292; Region: Oligosaccharyltransferase, STT3
subunit [Posttranslational modification, protein turnover,
chaperones]"
/db_xref="CDD:20078"
ORIGIN
1 gagggaggcg ggccttggct gctgtcaggg ttgagtgcgc cgctgaacgg atggcagggg
61 gagcagagtg ggttcctgag gagcatccgt gaggtatttg aatatcatca gttgccaccc
121 attgatgtca agatgactaa gcttggattt ttgcgattgt cctatgagaa gcaggacaca
181 cttctaaagc ttctcatcct gtcgatggct gctgtgttat ctttttctac tcgtcttttt
241 gctgtgctga gatttgaaag tgtcatccat gagtttgatc cgtactttaa ttatcggact
301 acccggtttc tggctgagga ggggttttat aaattccata actggtttga tgaccgggct
361 tggtaccctt tgggccgaat cattggagga acaatttacc caggtttaat gatcacttct
421 gctgcaatct accatgtact ccatttcttc catatcacca ttgacattcg gaatgtctgt
481 gttttcctgg ccccgctttt ctcctctttc accaccatcg ttacgtacca ccttaccaaa
541 gagctcaagg atgcaggagc tgggcttctt gctgctgcca tgattgctgt agttcctggg
601 tatatttctc gatctgtagc tggctcctat gataatgaag gaattgctat cttttgcatg
661 ctgcttactt actacatgtg gatcaaggca gtgaagactg gttccatcta ttgggctgcc
721 aagtgtgccc tcgcttattt ctacatggtc tcttcatggg gaggctatgt gttcctgatc
781 aacttgattc ctctacatgt cctggtgcta atgctgacag gccgtttttc tcaccggatc
841 tacgtagcct actgtactgt ttactgcctg ggcaccattc tttctatgca gatttccttt
901 gttggtttcc agcccgtcct ttcatcagaa cacatggcag cctttggagt gtttggtctc
961 tgtcagatcc atgctttcgt agattacctg tgcagcaagt tgaatccaca gcaattcgaa
1021 gttcttttcc ggagtgttat ctccctggtt ggctttgtcc tcctcactgt gggagctctc
1081 ctcatgctaa caggaaaaat ttctccctgg acagggcgtt tctactctct gctggatccc
1141 tcttatgcta agaataacat tcccattatt gcatctgttt ctgagcacca gcccacaacc
1201 tggtcttcct actattttga tctacagctc cttgtcttca tgtttccagt tggcctctat
1261 tactgcttta gcaacctgtc tgatgctcgg atttttatca tcatgtatgg tgtgaccagc
1321 atgtactttt cagctgtaat ggtgcgtcta atgctggtat tggcacctgt tatgtgcatt
1381 ctttctggca ttggtgtttc ccaggtggtg tccacatata tgaaaaatct ggacataagt
1441 cgcccagaca agaagagcaa gaagcaacag gattctactt accctattaa gaatgaggtg
1501 gcgagtggga tgatactggt catggctttc tttctcatca cctacacgtt tcattcgact
1561 tgggtgacca gtgaagccta ttcttctccc tccattgttc tgtctgctcg tggtggggat
1621 ggcagtagga tcatttttga tgacttccga gaagcgtatt attggctccg tcacaatact
1681 ccagaggatg caaaagtcat gtcatggtgg gattatggct accaaattac tgcaatggca
1741 aatcggacaa ttttagtgga caataacaca tggaataata cccatatttc tcgagtaggg
1801 caggcaatgg catccacaga agaaaaagcc tatgaaatca tgagggagct tgatgtcagc
1861 tatgtgcttg tcatttttgg aggccttact gggtattctt cggatgatat caacaagttt
1921 ctttggatgg tccggattgg aggaagcaca gagacaggaa gacacattaa ggagaatgac
1981 tactatactc ctactgggga attccgtgtt gatcgtgagg gttctccggt gctgctcaac
2041 tgccttatgt acaaaatgtg ttactaccgc tttgggcagg tctacacaga agccaagcgt
2101 ccaccaggct ttgaccgtgt tcgaaatgct gagattggta ataaagactt tgagcttgat
2161 gtcctggagg aagcgtatac cacagaacac tggctagtca ggatatacaa ggtaaaggac
2221 ctggataatc gaggcttgtc aaggacataa acgtcacatt gtgccctgag cattatgctt
2281 cgcactgagc gcgtcatgtt gaggacgctg aagatgtttt ttatatgcag tttataagaa
2341 cagccggatg gggttagaat tgtctgcaag ttttgccctg gacaatatgg gctgggccaa
2401 gtgaaatgat ttttataatt ctgagcaggt taccaaatga aatgttatgg ctttactttg
2461 gtcaattaaa aggggggggg gatttttttt aaatgtgcct tatttgtttt gacttaaatt
2521 ggctgatacg aggatcacag aagtgagcgg atggaagacc atatccatgc tctaggtccc
2581 caaatgaacc agataggagc atttttttct cctatcagca atctcaagga ctagctctgg
2641 ttcaacaaat gtaaacaaca actttgtcac acttttttgt tttttagcac ccaggtacaa
2701 tgctttcctt ataatgggtg cttaataaat ttttatcaaa tgaataaatg tttctgggac
2761 cagaggagtg ctgtttctgg gcaagaaaga cagctttctt gctgttatgt ctatgttctc
2821 gatgtctatt tctttagaag ctctttggct ttataaggac agaaagttgc tgagtattcc
2881 tgatctcacc agtatccttt caaactaatg gcagttattc tttttctaag tagaaatgtg
2941 aagcaaaagt gactaatcca gtagttctta agatcagtga aacatcaatc ctagaggaag
3001 acactcctcc aacatcaggt tgatgatcag tagatgtttc tggaatcaga tgtcattatg
3061 tggacctaca tgaagtttag gcattcaata cttcactaaa cctaaaacat agtaaatggc
3121 tctttgctca ttttctctag actgcactaa atctcttagg gttatccacc gtgagcttct
3181 gtttttctta atgtcagtct gctgtgttca tataccactt tgaggcttga ttacttggtt
3241 ttgaatccct tgctaaatat atacatagga agtgggaagt attgctacta gcaggtactt
3301 tgatatcatt gccagtctga ctgcaagaaa agagacttca aaaactacaa agcacagaga
3361 tcccatagat attttgtgtc aggataaata gctttctgtt ctgtataata ggatatttca
3421 tgtaatttat aacatagggc ataatcactg atgtatataa accatcttaa attaattata
3481 gtgtttctat ttaagaaaac aggaggaatt atatgacttt tagatagtca cagtggtact
3541 caatgcatat gtgcttaggt gtacttgtat acctaagggc ttttccttca aaccggtgta
3601 tgtactgtgt attttaactg tgggtgaaat tttagattta acagatgatt tgatatccta
3661 tatgtaaata cattatttga tttatataca gaactactgc ctagtgggaa aggttaacct
3721 gagacttatc aatatgatta acattacagg ttattagtaa gctttctcta tagtataaat
3781 gggatacccc cttttcatat cg