NM_024222 (Replaced XM_358385)

LOCUS NM_024222 4236 bp mRNA linear ROD 19-MAR-2005
DEFINITION Mus musculus RIKEN cDNA 1300006C19 gene (1300006C19Rik), mRNA.
ACCESSION NM_024222 XM_358385
VERSION NM_024222.2 GI:61651672
KEYWORDS .
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
Sciurognathi; Muridae; Murinae; Mus.
REFERENCE 1 (bases 1 to 4236)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BC052433.1.
On or before Mar 19, 2005 this sequence version replaced
gi:51765140, gi:23956183.
FEATURES Location/Qualifiers
source 1..4236
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6"
/db_xref="taxon:10090"
/chromosome="9"
gene 1..4236
/gene="1300006C19Rik"
/note="synonym: Simp"
/db_xref="GeneID:68292"
/db_xref="MGI:1915542"
CDS 366..2837
/gene="1300006C19Rik"
/note="go_component: cellular_component unknown [goid
0008372] [evidence ND];
go_function: transferase activity [goid 0016740] [evidence
IEA];
go_process: biological_process unknown [goid 0000004]
[evidence ND]"
/codon_start=1
/product="source of immunodominant MHC-associated
peptides"
/protein_id="NP_077184.2"
/db_xref="GI:61651673"
/db_xref="GeneID:68292"
/db_xref="MGI:1915542"
/translation="MAEPSAPESKHKSSLNSSPWSGLMALGNSRHGHHGPGTQSASRA
AAPKPGPPAGLSGGLSQPAGWQSLLSFTILFLAWLAGFSSRLFAVIRFESIIHEFDPW
FNYRSTHHLASHGFYEFLNWFDERAWYPLGRIVGGTVYPGLMITAGLIHWILNTLNIT
VHIRDVCVFLAPTFSGLTSISTFLLTRELWNQGAGLLAACFIAIVPGYISRSVAGSFD
NEGIAIFALQFTYYLWVKSVKTGSVFWTMCCCLSYFYMVSAWGGYVFIINLIPLHVFV
LLLMQRYSKRVYIAYSTFYIVGLILSMQIPFVGFQPIRTSEHMAAAGVFALLQAYAFL
QYLRDRLTKQEFQTLFFLGVSLAAGAVFLSVIYLTYTGYIAPWSGRFYSLWDTGYAKI
HIPIIASVSEHQPTTWVSFFFDLHILVCTFPAGLWFCIKNINDERVFVALYAISAVYF
AGVMVRLMLTLTPVVCMLSAIAFSNVFEHYLGDDMKRENPPVEDSSDEDDKRNPGNLY
DKAGKVRKHVTEQEKPEEGLGPNIKSIVTMLMLMLLMMFAVHCTWVTSNAYSSPSVVL
ASYNHDGTRNILDDFREAYFWLRQNTDEHARVMSWWDYGYQIAGMANRTTLVDNNTWN
NSHIALVGKAMSSNETAAYKIMRSLDVDYVLVIFGGVIGYSGDDINKFLWMVRIAEGE
HPKDIREGDYFTQQGEFRVDKAGSPTLLNCLMYKMSYYRFGEMQLDFRTPPGFDRTRN
AEIGNKDIKFKHLEEAFTSEHWLVRIYKVKAPDNRETLGHKPRVTNIVPKQKYLSKKT
TKRKRGYVKNKLVFKKGKKTSKKTV"
ORIGIN
1 gccgccgctc ctctggcgcc ctcgtcccgt cggctctcgc cgccaccgcc gcctcctcag
61 ccgcacgggg gacacggatg gctagtgggg cgcaggggcc ttttgggttg agaccgcgac
121 ggtcgcggcc actgttgagg cggagacttc ggatcgctgc cgcctccacc acccccagtg
181 tcccggcctc gcggtgctga gggcgggagc gcgcccagct cttcctccgc ctccgcctcc
241 tcctcctcct cgttgtcgtc gccgtcgccc tcctcctcct cctctgggtc tccgcccagc
301 acccctcgct ccaggcggcg gcggtggccg cggaggacga gcgagacccg ccgccggggc
361 acaacatggc ggagccctcg gccccggaga gcaagcacaa gtcgtccctc aactcgtccc
421 cgtggagcgg cctcatggct ctggggaaca gccgccacgg gcaccatggg cccggaaccc
481 agagcgcgtc cagggcggcg gcgccgaagc cggggccccc cgcggggctg tccgggggct
541 tgtcgcagcc ggccgggtgg cagtcgttgc tctccttcac catcctcttc ctggcctggc
601 tggccggctt cagctcgcgc ctcttcgccg tcatccgctt cgagagcatc atccacgagt
661 tcgacccgtg gtttaactat agatcaacac atcatcttgc atctcatgga ttctatgagt
721 ttctaaattg gtttgatgaa agagcatggt acccactggg aagaatagtg ggtggcaccg
781 tttacccagg gttgatgata acagctggcc ttattcattg gattttaaat acattgaaca
841 taacagttca cataagagat gtgtgtgtat tccttgcacc aacttttagc ggccttacat
901 ccatatctac gttcctgcta actagagaac tgtggaacca aggagcagga cttctagctg
961 cttgcttcat tgctatcgta ccagggtaca tatctcggtc agtggcggga tcctttgata
1021 atgaaggcat tgccattttt gcgcttcagt tcacttacta cttatgggta aagtctgtga
1081 agaccgggtc tgtgttctgg acaatgtgct gctgcttgtc atatttctac atggtctctg
1141 cgtggggagg ttatgtgttc atcatcaacc tcatccctct ccatgtgttt gtgttgctgc
1201 tgatgcagag gtacagcaag agagtctaca tagcatatag cactttctac attgtgggtt
1261 taatattatc catgcagata ccttttgtgg gatttcagcc aatcagaaca agcgagcaca
1321 tggcagctgc aggtgtcttt gcgctgctgc aagcttacgc ttttttgcag tatctgagag
1381 accggttgac aaaacaggag ttccagaccc ttttcttttt gggtgtctca ctagctgcag
1441 gcgctgtgtt ccttagtgtc atctatctga catacacagg ttatattgca ccatggagtg
1501 gcaggtttta ttcactatgg gatactgggt atgcaaaaat acacattcca attattgcat
1561 cagtgtctga acatcagcct acgacatggg tgtctttctt ctttgatcta catattcttg
1621 tatgtacctt cccagcaggc ctatggttct gcatcaaaaa tatcaacgat gaaagagtat
1681 ttgtcgctct gtatgcgatc agtgctgtct actttgccgg agtgatggtg cggctgatgc
1741 tgactctgac cccggtcgtc tgcatgctgt cggccatcgc cttctccaat gtttttgagc
1801 actatttggg ggatgacatg aaaagggaaa acccacctgt ggaggacagc agtgatgagg
1861 atgacaaaag aaacccagga aacttgtatg acaaggcagg taaagtgagg aagcatgtga
1921 cagagcaaga gaaacctgaa gagggcttgg gccccaacat caaaagcatt gtgaccatgc
1981 tgatgctcat gctcctgatg atgttcgcgg tccactgcac gtgggtcaca agcaacgcct
2041 actccagtcc aagtgtggtc cttgcctcct acaatcatga tggtaccagg aatatattag
2101 atgattttag agaagcgtac ttttggctga gacaaaacac ggatgaacac gcccgggtca
2161 tgtcgtggtg ggactacggc tatcagattg ctggcatggc caacaggacc actctggtgg
2221 ataacaacac ctggaacaac agccacatcg cactggtcgg aaaagctatg tcttccaatg
2281 aaacggccgc ctataaaatc atgaggtccc ttgatgtcga ttatgtgttg gttattttcg
2341 gaggagtgat tggctattcc ggggacgata tcaacaagtt cctctggatg gtcaggatag
2401 ctgaagggga gcatcccaaa gacatccggg aaggtgacta tttcacccag cagggagagt
2461 tccgagtaga caaagctggg tctcctactc tgttaaactg ccttatgtat aaaatgtcat
2521 actacagatt tggagaaatg cagctagatt ttcgcactcc cccaggcttt gaccgaacac
2581 gtaatgctga gattggaaat aaagacatta aattcaagca tttggaggaa gcttttacat
2641 cagagcactg gcttgtcagg atatataaag tgaaagcacc tgacaacagg gagacactag
2701 gtcacaaacc tcgagtcacc aacatcgtcc ccaaacagaa gtatttgtca aagaagacta
2761 ctaaaaggaa gcgtggctac gttaaaaata agctagtgtt taagaaaggc aagaagacct
2821 ctaagaagac tgtttaaatg cgctgttctg gcctcacttg cagcagtcct tgagagaacc
2881 ggtctttgcc ttctgctcat gtcctgtttc acagcaccaa gggtacagaa catcgctggg
2941 ccaagtcaat gtacaaaatg ttctggcaat gcctcattta aaattaaatt ggtttattga
3001 gaacagctgt ttctgatgtg taacgtgaag caagacagag ccctgctgtg agcagctggc
3061 agaagatttt ttttttttaa ttattggtac atattaccct tcaaatctga gaatttggac
3121 taattgcacc aaagaaccct ctaatttggt ccctggcaca tgcgtacctg tcaacttttt
3181 ttcttttaca agacctgcat tttatttgaa ctacccaaat agcaatatgt aagacagaaa
3241 tgcagatgtg atgagagctt cttgaccagt aaacaaacta gcccaggtct gagagagacg
3301 tgctaaagga gagtctacgt ctgggaactc tatttatttt cctgtttctc cggtgtgaag
3361 aatgtttcat caaatgtcca ctttgtcgct cactgccgct gtaagcagcc gctgctgacg
3421 gtgggcctcc ctccgcgtag ttagctgact agatgtttgt gttcaggcat ccggatgcac
3481 tgcggttagc gggcatcctc accaggtact cacagagcag attccatgca ttcttcattc
3541 aagggctaaa tttctctcct ttgggaatca tggcaagcgc acacagaacg ttgctggcca
3601 ggatggctgt tacctcagta ctgaggtcgg ctccatgttc ccacgcagaa gattaaggga
3661 aagcccttac ggtggacagg catgcagagt tcatttctgt gactctacac agtgacaaag
3721 gatttgtaaa ctttgcctgg attttcctca ttttatacca gttttgttca tcacgatggt
3781 ttctgttgac cgcttcatgt ttttatacct taagcatttg atgaaacact ctctagtgct
3841 ctctaggcgt ttcttacttt tattacaaat gtgacaattg tcaaaagatg cactaaaata
3901 taaatggaga ttgagcctgt tcattttcca gcttataggc aactttatac agacttgaaa
3961 tctttatcca gttgtttagt aaagtgagag agaggtttcc tgccacagga gaacttttac
4021 acaacacccc actgctttag tgggacagtt gagagcagtg tgtccctttt atgaagaacc
4081 cgtcatttac agcgctccgg gagagagaat gttactgcag atcccttttc cacggtgtag
4141 atactctgat ttatagaatt cattcttgat ccagatgatg gttctttcac agaccaataa
4201 aaaaaaaaaa gtataactaa aaaaaaaaaa aaaaaa